BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039D10LP1|AL430700
(943 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1362 1812 0.0
>3x_Contig1362
Length = 8864
Score = 1812 bits (913), Expect = 0.0
Identities = 936/943 (99%), Gaps = 3/943 (0%)
Strand = Plus / Plus
Query: 1 atgattgcgacggtgatggtgacgaaactactgccgaagctgctgctgccgctgctgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2787 atgattgcgacggtgatggtgacgaaactactgccgaagctgctgctgccgctgctgctg 2846
Query: 61 cagaggcagcnsntnancagcggccgcctgagcctcgctggcagttcctgtgttattctg 120
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2847 cagaggcagcagcta--cagcggccgcctgagcctcgctggcagttcctgtgttattctg 2904
Query: 121 cgaggctttatcttgcattggtaatggttcctgaggaggtgtgttggcttgagttctcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2905 cgaggctttatcttgcattggtaatggttcctgaggaggtgtgttggcttgagttctcgt 2964
Query: 181 ttgctccatcatatgagactcctttttttttatatttattattagcgatttttttattgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2965 ttgctccatcatatgagactcctttttttttatatttattattagcgatttttttattgg 3024
Query: 241 ttcctttgaatagagtcctctttataagtaagtttcaccaaatcacactgtcctatagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3025 ttcctttgaatagagtcctctttataagtaagtttcaccaaatcacactgtcctatagtg 3084
Query: 301 tacctgaattacaacagcagatactaagctattacaacttatactgtttcctcccttccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3085 tacctgaattacaacagcagatactaagctattacaacttatactgtttcctcccttccc 3144
Query: 361 tgttacttttagaaacgagcaaaccaaaagaaagaaaaaagaaaaagaaaatccacacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3145 tgttacttttagaaacgagcaaaccaaaagaaagaaaaaagaaaaagaaaatccacacag 3204
Query: 421 acccttgactgactcttcgaggattctagtttcttattctgcaataaattgccttgtgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3205 acccttgactgactcttcgaggattctagtttcttattctgcaataaattgccttgtgct 3264
Query: 481 tttgtcccgtttgatgttcgtgctagtactgattgctggctacttacaactgagggttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3265 tttgtcccgtttgatgttcgtgctagtactgattgctggctacttacaactgagggttct 3324
Query: 541 tgagacaccggggggtaaaaaattatgttgagtttaccaagttatgtttagttttcaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3325 tgagacaccggggggtaaaaaattatgttgagtttaccaagttatgtttagttttcaaat 3384
Query: 601 gatttagttttatttgtttttcaacttttttttttttttttttgcctctttccctgttcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3385 gatttagttttatttgtttttcaacttttttttttttttttttgcctctttccctgttcc 3444
Query: 661 gttgatagttaatatacgggtactagatatagacatagacaggtaaaaggtactcgatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3445 gttgatagttaatatacgggtactagatatagacatagacaggtaaaaggtactcgatat 3504
Query: 721 atagtggtgactcggctcctgtgacattcaatcaacggttgtagaattctgttccaatta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3505 atagtggtgactcggctcctgtgacattcaatcaacggttgtagaattctgttccaatta 3564
Query: 781 tttaaagaagggggagctttgaggggcgactctttcgtacagagtatacgagaagctttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3565 tttaaagaagggggagctttgaggggcgactctttcgtacagagtatacgagaagctttc 3624
Query: 841 ctgaattatatgtcacgtgaracaaattcgcaccatcatcaattacattatcatatgcat 900
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3625 ctgaattatatgtcacgtga-acaaattcgcaccatcatcaattacattatcatatgcat 3683
Query: 901 gaggtaacaagtaggaaaagcaactggttgtagccagttacta 943
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3684 gaggtaacaagtaggaaaagcaactggttgtagccagttacta 3726
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 21,432
Number of Sequences: 1807
Number of extensions: 21432
Number of successful extensions: 3346
Number of sequences better than 1.0e-20: 1
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)